C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleolar protein 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377705 NOL9-001 ENSG00000162408 9606 - 1:6521347-6554535 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000377705
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000377705 3.414±0.00 5.523±0.00 1.643±0.00 2.603±0.04 5.129±0.00 2.304±0.39 1.766±1.13 2.639±0.98 1.680±0.00 1.486±0.24 3.585±2.42 4.452±1.72 2.080±1.77 4.012±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000460 IMP maturation of 5.8S rRNA
GO:0003723 IEA RNA binding
GO:0005524 TAS ATP binding
GO:0005730 TAS nucleolus
GO:0016020 IDA membrane
GO:0016310 IEA phosphorylation
GO:0051731 IDA polynucleotide 5'-hydroxyl-kinase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000000000007 79
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000009 58
ENSMUST00000139308 Fkbp15-001 processed_transcript Mus_musculus 0.0004 53

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