C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 8B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377988 TMEM8B-201 ENSG00000137103 9606 + 9:35829498-35854846 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartMuscleOvaryPlacentaTestisENST00000377988
Transcript ID Adipose Adrenal Brain Breast Colon Heart Muscle Ovary Placenta Testis
ENST00000377988 1.626±0.00 2.242±0.00 6.028±0.00 1.496±1.04 1.439±0.00 3.868±0.00 1.761±1.00 7.719±6.02 1.831±0.00 3.672±0.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BQ CIL_0007BQ_0001 CGP 9:35808045-35815354

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005739 IEA mitochondrion
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IDA plasma membrane
GO:0007160 IMP cell-matrix adhesion
GO:0007346 TAS regulation of mitotic cell cycle
GO:0009986 IDA cell surface
GO:0016021 IEA integral component of membrane
GO:0040008 IEA regulation of growth

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107866 Tmem8b-001 protein_coding Mus_musculus 0 3413
ENSMUST00000107864 Tmem8b-003 protein_coding Mus_musculus 0 3210
ENSMUST00000107865 Tmem8b-002 protein_coding Mus_musculus 0 3092
ENSMUST00000167153 Tmem8b-009 protein_coding Mus_musculus 0 2039
ENSMUST00000141864 Tmem8b-008 processed_transcript Mus_musculus 0 712
ENSMUST00000134869 Tmem8b-004 processed_transcript Mus_musculus 0 712
ENSMUST00000154112 Tmem8b-005 processed_transcript Mus_musculus 0 664
ENSMUST00000143339 Tmem8b-007 protein_coding Mus_musculus 0 566
ENSMUST00000143774 Tmem8b-006 processed_transcript Mus_musculus 0 483

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