C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NADH dehydrogenase (ubiquinone) complex I, assembly factor 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378081 NDUFAF5-009 ENSG00000101247 9606 + 20:13785007-13818421 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartMuscleOvaryPlacentaENST00000378081
Transcript ID Bladder Brain Colon Heart Muscle Ovary Placenta
ENST00000378081 0.324±0.00 3.096±0.00 0.378±0.00 0.972±0.13 0.415±0.00 0.613±0.18 0.412±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000K CIL_00000K_0002 CGP 20:13714322-13821582
CIL_0002DD CIL_0002DD_0001 CGP 20:13784950-13996443

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008152 IEA metabolic process
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044825 Ndufaf5-001 protein_coding Mus_musculus 0 828
ENSMUST00000125913 Ndufaf5-002 processed_transcript Mus_musculus 0 688
ENSMUST00000123078 Ndufaf5-003 retained_intron Mus_musculus 0 204

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