C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+ transporting, lysosomal accessory protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378438 ATP6AP2-004 ENSG00000182220 9606 + X:40580908-40606637 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000378438
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000378438 24.022±0.00 24.688±0.00 1.198±0.00 28.001±6.14 14.363±5.55 13.128±10.28 7.208±6.27 54.986±0.00 13.369±4.74 46.834±0.00 4.075±0.00 20.320±9.70 39.345±9.26 21.463±13.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005QF CIL_0005QF_0001 CGP X:40049815-40606637
CIL_0005QG CIL_0005QG_0001 CGP X:40580908-40647554

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002003 IDA angiotensin maturation
GO:0004190 EXP aspartic-type endopeptidase activity
GO:0004872 IEA receptor activity
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0006508 EXP proteolysis
GO:0008219 IEA cell death
GO:0009897 IDA external side of plasma membrane
GO:0016021 IEA integral component of membrane
GO:0019899 IEA enzyme binding
GO:0021903 IMP rostrocaudal neural tube patterning
GO:0030177 IMP positive regulation of Wnt signaling pathway
GO:0032914 IDA positive regulation of transforming growth factor beta1 production
GO:0043005 IEA neuron projection
GO:0043408 IDA regulation of MAPK cascade
GO:0044267 TAS cellular protein metabolic process
GO:0044297 IEA cell body
GO:0048069 IMP eye pigmentation
GO:0060323 IMP head morphogenesis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033313 Atp6ap2-001 protein_coding Mus_musculus 0 1760
ENSMUST00000137277 Atp6ap2-002 retained_intron Mus_musculus 0 342

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