C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: unc-13 homolog B (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378495 UNC13B-001 ENSG00000198722 9606 + 9:35162062-35405338 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000378495
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000378495 3.953±0.00 3.666±0.00 2.110±0.00 1.249±0.05 6.933±0.05 4.034±1.10 4.086±0.00 7.292±0.00 3.357±2.90 9.156±1.60 2.125±1.39 5.484±2.82 2.612±0.87 7.924±1.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072T CIL_00072T_0001 CGP 9:35104112-35405338

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 TAS signal transducer activity
GO:0004872 TAS receptor activity
GO:0005515 IPI:IEA protein binding
GO:0005737 TAS cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005829 IDA cytosol
GO:0005886 ISS plasma membrane
GO:0006915 TAS apoptotic process
GO:0007165 TAS signal transduction
GO:0007268 ISS synaptic transmission
GO:0007528 IEA neuromuscular junction development
GO:0007588 TAS excretion
GO:0010808 ISS positive regulation of synaptic vesicle priming
GO:0016081 IEA synaptic vesicle docking involved in exocytosis
GO:0016082 ISS synaptic vesicle priming
GO:0019992 IEA diacylglycerol binding
GO:0030054 IEA cell junction
GO:0031594 IEA neuromuscular junction
GO:0035249 IEA synaptic transmission, glutamatergic
GO:0035556 IEA intracellular signal transduction
GO:0043195 ISS terminal bouton
GO:0046872 IEA metal ion binding
GO:0048172 IEA regulation of short-term neuronal synaptic plasticity
GO:0048786 TAS presynaptic active zone
GO:0060384 IEA innervation
GO:0097151 ISS positive regulation of inhibitory postsynaptic membrane potential

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079978 Unc13b-001 protein_coding Mus_musculus 0 6654
ENSMUST00000107953 Unc13b-014 protein_coding Mus_musculus 0 5803
ENSMUST00000107952 Unc13b-012 protein_coding Mus_musculus 0 5664
ENSMUST00000163653 Unc13b-002 protein_coding Mus_musculus 0 5651
ENSMUST00000149945 Unc13b-005 retained_intron Mus_musculus 0 2102
ENSMUST00000177517 Unc13a-002 protein_coding Mus_musculus 0 1790
ENSMUST00000030170 Unc13a-001 protein_coding Mus_musculus 0 1790
ENSMUST00000171234 Unc13b-013 retained_intron Mus_musculus 0 1142
ENSMUST00000132310 Unc13b-009 processed_transcript Mus_musculus 0 968
ENSMUST00000168032 Unc13b-016 protein_coding Mus_musculus 0 953
ENSMUST00000143653 Unc13b-011 retained_intron Mus_musculus 0 870
ENSMUST00000153168 Unc13b-010 retained_intron Mus_musculus 0 804
ENSMUST00000145899 Unc13b-007 protein_coding Mus_musculus 0 588
ENSDART00000126567 UNC13A (5 of 5)-201 protein_coding Danio_rerio 0 558
ENSMUST00000164434 Unc13b-015 processed_transcript Mus_musculus 0 510
ENSMUST00000176127 Unc13a-007 protein_coding Mus_musculus 0 464
ENSMUST00000127597 Unc13b-008 retained_intron Mus_musculus 0 193
ENSDART00000088603 UNC13A (1 of 5)-201 protein_coding Danio_rerio 1.99993e-41 176
ENSDART00000135692 UNC13A (1 of 5)-001 protein_coding Danio_rerio 8.00001e-41 174
ENSMUST00000175909 Unc13a-008 nonsense_mediated_decay Mus_musculus 5e-33 148
ENSMUST00000151611 Unc13b-003 processed_transcript Mus_musculus 1e-19 104

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