C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein, X-linked
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379177 ZFX-001 ENSG00000005889 9606 + X:24149745-24216089 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379177
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379177 3.837±0.00 0.852±0.00 0.546±0.00 1.482±0.13 1.654±1.01 1.769±0.00 2.791±0.00 0.923±0.41 1.752±0.00 2.092±0.00 1.357±0.53 0.663±0.30 1.214±0.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001JE CIL_0001JE_0002 CGP X:24054716-24216255

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003713 TAS transcription coactivator activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088102 Zfx-001 protein_coding Mus_musculus 0 3864
ENSMUST00000113927 Zfx-201 protein_coding Mus_musculus 0 3862
ENSMUST00000113926 Zfx-002 protein_coding Mus_musculus 0 3862
ENSMUST00000180673 Zfa-ps-002 processed_transcript Mus_musculus 0 2591
ENSMUST00000180526 Zfa-ps-001 transcribed_processed_pseudogene Mus_musculus 0 2135
ENSMUST00000115891 Zfy2-001 protein_coding Mus_musculus 0 1171
ENSMUST00000187148 Zfy2-002 protein_coding Mus_musculus 0 1171
ENSMUST00000137853 Zfx-003 protein_coding Mus_musculus 0 793
ENSMUST00000113925 Zfx-004 protein_coding Mus_musculus 0 771
ENSMUST00000065545 Zfy1-001 protein_coding Mus_musculus 0 387
ENSMUST00000189888 Zfy1-002 protein_coding Mus_musculus 0 387
ENSMUST00000135661 Zfx-005 processed_transcript Mus_musculus 0 344
ENSMUST00000130312 Zfx-006 retained_intron Mus_musculus 0.000000000008 79

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