C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein, X-linked
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379188 ZFX-201 ENSG00000005889 9606 + X:24149724-24216255 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379188
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379188 1.012±0.00 0.402±0.00 1.228±0.43 2.612±0.00 0.761±0.00 0.668±0.34 0.356±0.00 2.513±0.00 1.043±0.00 0.991±0.31 1.582±0.87 0.832±0.38 0.527±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001JE CIL_0001JE_0002 CGP X:24054716-24216255

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003713 TAS transcription coactivator activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113927 Zfx-201 protein_coding Mus_musculus 0 3757
ENSMUST00000113926 Zfx-002 protein_coding Mus_musculus 0 3757
ENSMUST00000088102 Zfx-001 protein_coding Mus_musculus 0 3757
ENSMUST00000180673 Zfa-ps-002 processed_transcript Mus_musculus 0 2591
ENSMUST00000180526 Zfa-ps-001 transcribed_processed_pseudogene Mus_musculus 0 2135
ENSMUST00000115891 Zfy2-001 protein_coding Mus_musculus 0 1171
ENSMUST00000187148 Zfy2-002 protein_coding Mus_musculus 0 1171
ENSMUST00000137853 Zfx-003 protein_coding Mus_musculus 0 688
ENSMUST00000113925 Zfx-004 protein_coding Mus_musculus 0 664
ENSMUST00000065545 Zfy1-001 protein_coding Mus_musculus 0 350
ENSMUST00000189888 Zfy1-002 protein_coding Mus_musculus 0 350
ENSMUST00000130312 Zfx-006 retained_intron Mus_musculus 4e-20 106

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