C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PAK1 interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379568 PAK1IP1-001 ENSG00000111845 9606 + 6:10694695-10709782 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379568
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379568 3.136±0.00 7.345±0.00 0.685±0.00 2.786±0.66 3.164±1.13 2.390±1.44 1.477±0.91 3.976±1.45 2.648±1.60 2.027±0.16 1.397±1.08 7.436±5.56 6.642±4.39 9.824±3.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097A CIL_00097A_0001 VISTA 6:10093642-10694839
CIL_00086X CIL_00086X_0001 VISTA 6:10107199-10709812
CIL_000383 CIL_000383_0001 CGP 6:10694695-10731129

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IEA nucleolus
GO:0005886 IDA plasma membrane
GO:0008283 IEA cell proliferation
GO:0009968 IEA negative regulation of signal transduction
GO:0060021 IEA palate development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046951 Pak1ip1-001 protein_coding Mus_musculus 0 856
ENSMUST00000174551 Pak1ip1-004 retained_intron Mus_musculus 0 669
ENSMUST00000174472 Pak1ip1-003 retained_intron Mus_musculus 0 407

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