C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat domain 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380094 ANKRD16-003 ENSG00000134461 9606 - 10:5861617-5889898 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLiverMuscleOvaryTestisENST00000380094
Transcript ID Adipose Adrenal Brain Breast Heart Liver Muscle Ovary Testis
ENST00000380094 0.364±0.00 0.743±0.00 2.817±0.00 0.630±0.00 0.314±0.00 0.167±0.04 0.225±0.21 1.222±0.00 0.838±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097T CIL_00097T_0001 VISTA 10:5274654-5878045
CIL_0008HB CIL_0008HB_0001 VISTA 10:5286025-5887846

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056108 Ankrd16-001 protein_coding Mus_musculus 0 950
ENSMUST00000125024 Ankrd16-004 retained_intron Mus_musculus 0 575
ENSMUST00000150320 Ankrd16-003 retained_intron Mus_musculus 0 531
ENSMUST00000156067 Ankrd16-006 nonsense_mediated_decay Mus_musculus 0 464
ENSMUST00000150213 Ankrd16-002 retained_intron Mus_musculus 0 464
ENSMUST00000130186 Ankrd16-007 processed_transcript Mus_musculus 0 233
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000000006 68

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