C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: erbb2 interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380943 ERBB2IP-001 ENSG00000112851 9606 + 5:65926556-66080516 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380943
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380943 4.099±0.00 4.087±0.00 3.713±0.00 7.170±0.05 4.237±0.32 6.533±1.13 2.260±0.72 4.891±0.91 5.609±3.76 5.615±2.19 1.326±0.10 4.570±1.71 2.152±0.66 6.159±0.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000775 CIL_000775_0002 CGP 5:65722196-66082549

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005176 TAS ErbB-2 class receptor binding
GO:0005178 IPI integrin binding
GO:0005200 NAS structural constituent of cytoskeleton
GO:0005515 IPI:IEA protein binding
GO:0005604 TAS basement membrane
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0007049 NAS cell cycle
GO:0007155 NAS cell adhesion
GO:0007165 TAS signal transduction
GO:0007173 TAS epidermal growth factor receptor signaling pathway
GO:0007229 NAS integrin-mediated signaling pathway
GO:0009925 NAS basal plasma membrane
GO:0016049 NAS cell growth
GO:0030056 IDA hemidesmosome
GO:0045104 NAS intermediate filament cytoskeleton organization
GO:0045175 NAS basal protein localization
GO:0045197 NAS establishment or maintenance of epithelial cell apical/basal polarity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022222 Erbb2ip-201 protein_coding Mus_musculus 0 4314
ENSMUST00000188997 Erbb2ip-004 protein_coding Mus_musculus 0 4263
ENSMUST00000191275 Erbb2ip-005 protein_coding Mus_musculus 0 4261
ENSMUST00000169083 Erbb2ip-006 protein_coding Mus_musculus 0 4261
ENSMUST00000091269 Erbb2ip-001 protein_coding Mus_musculus 0 4259
ENSMUST00000053927 Erbb2ip-002 protein_coding Mus_musculus 0 4259
ENSMUST00000189323 Erbb2ip-003 retained_intron Mus_musculus 0 1755

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