C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T cell receptor alpha variable 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000390432 TRAV10-001 ENSG00000211784 9606 + 14:21825472-21826075 TR_V_gene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastLungOvaryPlacentaTestisENST00000390432
Transcript ID Adipose Adrenal Breast Lung Ovary Placenta Testis
ENST00000390432 0.258±0.00 1.312±0.00 0.680±0.00 0.586±0.00 0.133±0.03 0.324±0.00 0.134±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CX CIL_0008CX_0001 VISTA 14:21403052-22005074

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103648 Trav11d-001 TR_V_gene Mus_musculus 1e-37 159
ENSMUST00000103585 Trav11-201 IG_LV_gene Mus_musculus 5e-37 158

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