C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T cell receptor alpha variable 13-1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000390436 TRAV13-1-001 ENSG00000211788 9606 + 14:21868839-21869365 TR_V_gene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastLungOvaryTestisENST00000390436
Transcript ID Adrenal Bladder Breast Lung Ovary Testis
ENST00000390436 2.928±0.00 0.699±0.00 0.767±0.00 1.071±0.00 0.613±0.47 0.100±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CX CIL_0008CX_0001 VISTA 14:21403052-22005074

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103664 Trav5-4-001 TR_V_gene Mus_musculus 0 206
ENSMUST00000179997 Trav5n-4-201 IG_LV_gene Mus_musculus 0 200
ENSMUST00000179701 Trav5d-4-201 IG_LV_gene Mus_musculus 0 200

Loading