C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADAMTS-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393060 ADAMTSL2-201 ENSG00000197859 9606 + 9:133534853-133575518 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000393060
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000393060 14.368±0.00 1.694±1.26 0.812±0.32 0.243±0.00 1.572±1.36 6.935±5.51 2.896±0.00 11.556±0.00 0.475±0.20 5.100±5.22 2.659±0.31 3.483±3.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014U CIL_00014U_0001 CGP 9:133514586-133575519
CIL_00014V CIL_00014V_0001 CGP 9:133532164-133586197

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0005515 IPI protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IEA proteolysis
GO:0008233 IEA peptidase activity
GO:0008270 IEA zinc ion binding
GO:0030512 IMP negative regulation of transforming growth factor beta receptor signaling pathway
GO:0031012 IEA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091233 Adamtsl2-001 protein_coding Mus_musculus 0 2868
ENSMUST00000169787 Adamtsl2-005 retained_intron Mus_musculus 0 1297
ENSMUST00000139633 Adamtsl2-002 retained_intron Mus_musculus 0 538
ENSMUST00000130600 Adamtsl2-003 retained_intron Mus_musculus 0 411

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