C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: netrin G2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393229 NTNG2-001 ENSG00000196358 9606 + 9:132161947-132244534 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000393229
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000393229 0.068±0.00 0.636±0.00 2.627±1.78 0.082±0.00 0.921±0.00 0.158±0.00 0.066±0.06 2.437±0.00 0.044±0.00 0.291±0.02 0.403±0.16 0.608±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EG CIL_0002EG_0002 CGP 9:131860107-132244534

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IPI:IEA protein binding
GO:0005886 IEA plasma membrane
GO:0007409 ISS axonogenesis
GO:0030424 IEA axon
GO:0046658 ISS anchored component of plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183583 Ntng2-005 nonsense_mediated_decay Mus_musculus 0 1980
ENSMUST00000177689 Ntng2-201 protein_coding Mus_musculus 0 1973
ENSMUST00000102873 Ntng2-002 protein_coding Mus_musculus 0 1956
ENSMUST00000071201 Ntng2-004 protein_coding Mus_musculus 0 1489
ENSMUST00000091153 Ntng2-003 protein_coding Mus_musculus 0 1328
ENSMUST00000048455 Ntng2-001 protein_coding Mus_musculus 0 1328
ENSMUST00000149096 Ntng2-006 processed_transcript Mus_musculus 0 372

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