C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: beta-1,4-N-acetyl-galactosaminyl transferase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393354 B4GALNT2-002 ENSG00000167080 9606 + 17:49132769-49169874 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLungOvaryPlacentaTestisENST00000393354
Transcript ID Breast Colon Lung Ovary Placenta Testis
ENST00000393354 0.035±0.00 0.418±0.00 0.092±0.07 0.100±0.00 0.275±0.26 0.121±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MX CIL_0004MX_0002 CGP 17:49132460-49210574

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006486 IEA protein glycosylation
GO:0008376 IDA acetylgalactosaminyltransferase activity
GO:0016021 NAS integral component of membrane
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0019276 IDA UDP-N-acetylgalactosamine metabolic process
GO:0022408 IDA negative regulation of cell-cell adhesion
GO:0030173 IEA integral component of Golgi membrane
GO:0030259 IEA lipid glycosylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038343 B4galnt2-001 protein_coding Mus_musculus 0 1064

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