C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methylsterol monooxygenase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393766 MSMO1-002 ENSG00000052802 9606 + 4:165327686-165343029 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000393766
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000393766 1.262±0.00 4.973±0.00 11.729±0.00 2.421±0.00 3.475±0.00 0.653±0.24 7.812±4.27 36.331±35.18 42.896±0.00 0.593±0.00 9.435±5.48 2.589±0.60 6.093±0.13

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000254 IEA C-4 methylsterol oxidase activity
GO:0005506 IEA iron ion binding
GO:0005783 TAS endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005886 TAS plasma membrane
GO:0006631 TAS fatty acid metabolic process
GO:0006633 IEA fatty acid biosynthetic process
GO:0006695 TAS cholesterol biosynthetic process
GO:0008202 TAS steroid metabolic process
GO:0016021 IEA integral component of membrane
GO:0016491 IEA oxidoreductase activity
GO:0044281 TAS small molecule metabolic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034015 Msmo1-001 protein_coding Mus_musculus 0 573
ENSMUST00000145216 Msmo1-002 processed_transcript Mus_musculus 0 422
ENSMUST00000132013 Msmo1-003 retained_intron Mus_musculus 0 318
ENSMUST00000140861 Msmo1-006 processed_transcript Mus_musculus 0 315

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