C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 207
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394673 ZNF207-002 ENSG00000010244 9606 + 17:32350138-32370343 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000394673
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000394673 16.940±0.00 19.456±0.00 4.881±0.00 14.870±0.00 16.744±0.00 14.185±0.56 15.133±0.00 13.996±6.60 10.544±6.03 18.941±7.59 4.948±1.81 17.702±5.15 25.432±2.89 28.051±8.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IX CIL_0005IX_0001 CGP 17:32324565-32381886
CIL_0000VN CIL_0000VN_0001 CGP 17:32350117-32483318

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000070 IMP mitotic sister chromatid segregation
GO:0000776 IMP kinetochore
GO:0003677 IEA DNA binding
GO:0003700 NAS sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005874 IEA microtubule
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0007094 IMP mitotic spindle assembly checkpoint
GO:0008017 IDA microtubule binding
GO:0008270 NAS zinc ion binding
GO:0008608 IMP attachment of spindle microtubules to kinetochore
GO:0044822 IDA poly(A) RNA binding
GO:0050821 IMP protein stabilization
GO:0051983 IMP regulation of chromosome segregation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017567 Zfp207-002 protein_coding Mus_musculus 0 3016
ENSMUST00000188489 Zfp207-202 protein_coding Mus_musculus 0 2156
ENSMUST00000178665 Zfp207-004 nonsense_mediated_decay Mus_musculus 0 2156
ENSMUST00000165565 Zfp207-201 protein_coding Mus_musculus 0 1712
ENSMUST00000053740 Zfp207-001 protein_coding Mus_musculus 0 1301
ENSMUST00000108216 Zfp207-005 protein_coding Mus_musculus 0 1301
ENSMUST00000153824 Zfp207-006 protein_coding Mus_musculus 0 1037
ENSMUST00000123726 Zfp207-003 nonsense_mediated_decay Mus_musculus 0 845

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