C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CD72 molecule
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396757 CD72-001 ENSG00000137101 9606 - 9:35609533-35619542 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartLiverLungMuscleOvaryPlacentaENST00000396757
Transcript ID Adrenal Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENST00000396757 11.883±0.00 0.622±0.00 3.372±0.00 0.106±0.00 0.446±0.00 7.968±0.00 0.621±0.00 2.056±0.81 2.287±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072R CIL_00072R_0001 CGP 9:35561831-35610041
CIL_00072S CIL_00072S_0001 CGP 9:35605305-35646810
CIL_00072P CIL_00072P_0001 CGP 9:35609533-35650950

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004888 NAS transmembrane signaling receptor activity
GO:0005102 TAS receptor binding
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0007155 TAS cell adhesion
GO:0007165 NAS signal transduction
GO:0007411 TAS axon guidance
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098104 Cd72-005 protein_coding Mus_musculus 0 638
ENSMUST00000060864 Tesk1-001 protein_coding Mus_musculus 0 638
ENSMUST00000138981 Tesk1-002 nonsense_mediated_decay Mus_musculus 0 614
ENSMUST00000030179 Cd72-001 protein_coding Mus_musculus 2e-23 115
ENSMUST00000107925 Cd72-003 protein_coding Mus_musculus 2e-23 115
ENSMUST00000107926 Cd72-002 protein_coding Mus_musculus 2e-23 115
ENSMUST00000098105 Cd72-006 protein_coding Mus_musculus 5e-19 100

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