C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: v-myb avian myeloblastosis viral oncogene homolog-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396863 MYBL2-201 ENSG00000101057 9606 + 20:43667019-43716495 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaENST00000396863
Transcript ID Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENST00000396863 0.065±0.00 0.395±0.00 2.995±0.00 0.025±0.00 0.020±0.00 0.127±0.00 0.242±0.00 0.652±0.00 0.585±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00044J CIL_00044J_0001 CGP 20:43590931-43716496
CIL_00044K CIL_00044K_0001 CGP 20:43667019-43726998

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0051726 TAS regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018005 Mybl2-001 protein_coding Mus_musculus 0 1866
ENSMUST00000133322 Mybl2-004 retained_intron Mus_musculus 0 538
ENSMUST00000142729 Mybl2-005 protein_coding Mus_musculus 0 468
ENSMUST00000137620 Mybl2-002 processed_transcript Mus_musculus 0 381

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