C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: A kinase (PRKA) anchor protein 8-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397410 AKAP8L-004 ENSG00000011243 9606 - 19:15380048-15419054 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397410
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397410 14.808±0.00 20.103±0.00 20.530±18.16 10.192±5.99 14.055±12.02 9.105±7.26 16.878±0.00 2.957±0.45 15.407±13.68 36.207±0.00 13.214±6.14 12.208±6.22 32.946±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000443 CIL_000443_0001 CGP 19:15353385-15419141
CIL_00020J CIL_00020J_0001 CGP 19:15380048-15449951

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA:IDA nucleus
GO:0005737 IDA cytoplasm
GO:0008150 ND biological_process
GO:0016363 IDA nuclear matrix
GO:0017151 TAS DEAD/H-box RNA helicase binding
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050214 Akap8l-201 protein_coding Mus_musculus 0 2346

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