C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2I
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397514 UBE2I-001 ENSG00000103275 9606 + 16:1309510-1327017 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397514
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397514 9.285±0.00 19.192±0.00 0.888±0.00 8.181±5.67 6.495±4.65 18.098±0.00 3.616±2.84 5.641±4.85 2.551±0.41 3.278±1.85 5.757±5.46 17.903±14.28 16.378±3.08 16.921±4.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031K CIL_00031K_0002 CGP 16:1308880-1349438

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0000795 TAS synaptonemal complex
GO:0004842 TAS ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0006464 TAS cellular protein modification process
GO:0006511 TAS ubiquitin-dependent protein catabolic process
GO:0007059 IEA chromosome segregation
GO:0007067 IEA mitotic nuclear division
GO:0008134 IPI transcription factor binding
GO:0016032 IEA viral process
GO:0016605 IDA PML body
GO:0016925 IEA protein sumoylation
GO:0019789 IDA SUMO ligase activity
GO:0019899 IPI enzyme binding
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0071535 IPI RING-like zinc finger domain binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173713 Ube2i-001 protein_coding Mus_musculus 0 747
ENSMUST00000049911 Ube2i-005 protein_coding Mus_musculus 0 747
ENSMUST00000172618 Ube2i-003 protein_coding Mus_musculus 0 745
ENSMUST00000173084 Ube2i-002 protein_coding Mus_musculus 0 745
ENSMUST00000174031 Ube2i-010 protein_coding Mus_musculus 0 741
ENSMUST00000174001 Ube2i-006 protein_coding Mus_musculus 0 632
ENSMUST00000121302 Gm14176-001 processed_pseudogene Mus_musculus 0 593
ENSMUST00000121308 Gm5931-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000174216 Ube2i-014 protein_coding Mus_musculus 0 466
ENSDART00000052746 ube2i2-001 protein_coding Danio_rerio 0 398
ENSDART00000153974 ube2i2-002 protein_coding Danio_rerio 0 392
ENSDART00000156555 ube2i2-003 protein_coding Danio_rerio 0 374
ENSMUST00000172569 Ube2i-013 retained_intron Mus_musculus 0 241
ENSDART00000155648 ube2i2-004 retained_intron Danio_rerio 0 202

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