C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome b5 type A (microsomal)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397914 CYB5A-005 ENSG00000166347 9606 - 18:74253438-74291973 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397914
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397914 46.804±0.00 26.723±0.00 29.896±0.00 10.133±4.04 74.179±62.60 44.974±32.77 9.812±3.91 199.277±25.28 217.745±198.66 69.360±31.25 3.843±1.22 18.605±5.80 28.868±10.68 32.123±11.72

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004033 TAS aldo-keto reductase (NADP) activity
GO:0004129 TAS cytochrome-c oxidase activity
GO:0005741 TAS mitochondrial outer membrane
GO:0005783 IEA endoplasmic reticulum
GO:0006766 TAS vitamin metabolic process
GO:0006767 TAS water-soluble vitamin metabolic process
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0019852 TAS L-ascorbic acid metabolic process
GO:0019899 IPI enzyme binding
GO:0020037 IEA heme binding
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome
GO:1902600 TAS hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159837 Cyb5a-004 retained_intron Mus_musculus 6e-38 161
ENSMUST00000163083 Cyb5a-002 protein_coding Mus_musculus 8e-37 158
ENSMUST00000160180 Cyb5a-001 protein_coding Mus_musculus 8e-37 158
ENSMUST00000025549 Cyb5a-005 nonsense_mediated_decay Mus_musculus 2e-28 130

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