C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: StAR-related lipid transfer (START) domain containing 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399365 STARD13-001 ENSG00000133121 9606 - 13:33103170-33206006 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000399365
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000399365 0.844±0.00 1.399±0.00 1.437±0.13 1.120±0.00 2.291±1.19 1.271±0.00 1.523±0.00 3.601±0.00 1.901±1.13 0.115±0.00 1.748±1.09 2.397±1.60 0.466±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UX CIL_0000UX_0001 CGP 13:33016433-33350630

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005739 IEA mitochondrion
GO:0005811 IEA lipid particle
GO:0005829 TAS cytosol
GO:0007165 IEA signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0008289 IEA lipid binding
GO:0016020 IEA membrane
GO:0043547 IEA positive regulation of GTPase activity
GO:0051056 TAS regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110483 Stard13-001 protein_coding Mus_musculus 0 3380
ENSMUST00000062015 Stard13-002 protein_coding Mus_musculus 0 1694
ENSDART00000114382 stard13b-201 protein_coding Danio_rerio 0 610
ENSDART00000156922 stard13b-001 protein_coding Danio_rerio 0 610
ENSMUST00000141117 Stard13-003 processed_transcript Mus_musculus 0 385
ENSMUST00000146814 Stard13-004 retained_intron Mus_musculus 0 302
ENSMUST00000126770 Stard13-005 protein_coding Mus_musculus 0 285

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