C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: membrane associated guanylate kinase, WW and PDZ domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000402939 MAGI1-001 ENSG00000151276 9606 - 3:65356378-66038308 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLiverOvaryTestisENST00000402939
Transcript ID Adipose Adrenal Breast Colon Liver Ovary Testis
ENST00000402939 1.941±0.00 2.010±0.00 2.151±0.00 1.941±0.00 2.241±0.00 0.751±0.00 7.131±1.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008H8 CIL_0008H8_0001 VISTA 3:65304306-65905890
CIL_00034P CIL_00034P_0001 CGP 3:65353525-66388116

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005911 TAS cell-cell junction
GO:0005923 IEA tight junction
GO:0006461 NAS protein complex assembly
GO:0007155 TAS cell adhesion
GO:0007166 TAS cell surface receptor signaling pathway
GO:0008022 TAS protein C-terminus binding
GO:0030054 IDA cell junction
GO:0042995 IDA cell projection
GO:0051393 IPI alpha-actinin binding
GO:0070997 IMP neuron death

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089317 Magi1-202 protein_coding Mus_musculus 0 3227
ENSMUST00000093769 Magi1-203 protein_coding Mus_musculus 0 2579
ENSMUST00000055224 Magi1-201 protein_coding Mus_musculus 0 2370
ENSDART00000044423 magi1b-201 protein_coding Danio_rerio 0 584
ENSDART00000103969 magi1b-001 protein_coding Danio_rerio 0 584
ENSDART00000102696 magi1a-201 protein_coding Danio_rerio 0 505
ENSDART00000142217 magi1a-001 protein_coding Danio_rerio 0 505

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