C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lipase, family member N
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404459 LIPN-001 ENSG00000204020 9606 + 10:88761406-88778242 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartLiverLungOvaryPlacentaTestisENST00000404459
Transcript ID Adipose Breast Heart Liver Lung Ovary Placenta Testis
ENST00000404459 0.085±0.00 0.230±0.00 0.078±0.00 0.041±0.00 0.370±0.05 0.022±0.00 0.039±0.00 0.017±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HX CIL_0003HX_0001 CGP 10:88724544-88778242
CIL_0001S8 CIL_0001S8_0001 CGP 10:88761406-88820546

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0006629 IEA lipid metabolic process
GO:0016042 IEA lipid catabolic process
GO:0016788 IEA hydrolase activity, acting on ester bonds

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025682 Lipn-001 protein_coding Mus_musculus 0 1225
ENSMUST00000126710 Lipn-003 protein_coding Mus_musculus 0 603
ENSMUST00000148821 Lipn-002 nonsense_mediated_decay Mus_musculus 0 475

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