C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stonin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000406226 STON1-001 ENSG00000243244 9606 + 2:48530186-48598513 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000406226
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000406226 0.936±0.00 0.311±0.00 0.691±0.00 4.383±0.00 0.745±0.00 2.214±0.00 3.736±3.65 3.611±0.00 0.833±0.00 2.136±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IT CIL_0007IT_0001 CGP 2:48440598-48598513

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006886 IEA intracellular protein transport
GO:0006897 IEA endocytosis
GO:0016192 IEA vesicle-mediated transport
GO:0030100 IDA regulation of endocytosis
GO:0030131 IEA clathrin adaptor complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163588 Ston1-201 protein_coding Mus_musculus 0 1664
ENSMUST00000150023 Ston1-002 protein_coding Mus_musculus 0 1664
ENSMUST00000064035 Ston1-001 protein_coding Mus_musculus 0 1664
ENSMUST00000153613 Ston1-006 processed_transcript Mus_musculus 0 331

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