C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: patatin-like phospholipase domain containing 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000406427 PNPLA7-201 ENSG00000130653 9606 - 9:137459953-137550534 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000406427
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000406427 3.815±0.00 3.909±0.00 2.455±2.37 0.603±0.00 1.329±0.00 0.583±0.32 0.455±0.00 0.363±0.20 3.589±1.11 2.657±0.00 0.376±0.15 0.651±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035F CIL_00035F_0002 CGP 9:137459953-137552555

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004622 IEA lysophospholipase activity
GO:0005634 IEA nucleus
GO:0005739 IEA mitochondrion
GO:0005764 IEA lysosome
GO:0005783 IEA endoplasmic reticulum
GO:0006629 IEA lipid metabolic process
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045295 Pnpla7-001 protein_coding Mus_musculus 0 3223
ENSMUST00000137913 Pnpla7-002 retained_intron Mus_musculus 0 2324
ENSMUST00000139643 Pnpla7-003 retained_intron Mus_musculus 0 1816
ENSMUST00000132082 Pnpla7-004 retained_intron Mus_musculus 0 1417
ENSDART00000002118 pnpla7b-201 protein_coding Danio_rerio 0 809
ENSDART00000145061 pnpla7b-001 protein_coding Danio_rerio 0 809
ENSMUST00000152777 Pnpla7-006 protein_coding Mus_musculus 0 575
ENSMUST00000155601 Pnpla7-012 nonsense_mediated_decay Mus_musculus 0 416
ENSDART00000128179 pnpla7b-202 protein_coding Danio_rerio 0 340
ENSMUST00000154359 Pnpla7-011 retained_intron Mus_musculus 0 255
ENSMUST00000153618 Pnpla7-005 protein_coding Mus_musculus 0 250
ENSMUST00000128517 Pnpla7-013 retained_intron Mus_musculus 0 196
ENSMUST00000138536 Pnpla7-014 retained_intron Mus_musculus 2.94273e-44 185

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