C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aminolevulinate dehydratase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409155 ALAD-001 ENSG00000148218 9606 - 9:113386317-113401333 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409155
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409155 7.741±0.00 13.753±0.00 0.621±0.00 2.272±1.82 22.412±22.03 12.655±0.00 10.388±8.95 12.937±7.37 17.871±16.68 5.341±0.00 6.281±0.00 11.381±7.58 17.907±5.43 11.398±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000P8 CIL_0000P8_0001 CGP 9:113373419-113401333
CIL_0004CD CIL_0004CD_0001 CGP 9:113386317-113410672

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 TAS catalytic activity
GO:0004655 IDA:IEA porphobilinogen synthase activity
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0006778 TAS porphyrin-containing compound metabolic process
GO:0006782 IEA protoporphyrinogen IX biosynthetic process
GO:0006783 IDA heme biosynthetic process
GO:0008270 IDA zinc ion binding
GO:0032791 IDA lead ion binding
GO:0033014 IEA tetrapyrrole biosynthetic process
GO:0042802 IPI identical protein binding
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0051260 IPI protein homooligomerization
GO:0070062 IDA extracellular vesicular exosome
GO:0071353 IEA cellular response to interleukin-4

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030090 Alad-001 protein_coding Mus_musculus 0 1142
ENSMUST00000107444 Alad-002 protein_coding Mus_musculus 0 1142
ENSMUST00000137448 Alad-003 processed_transcript Mus_musculus 0 651

Loading