C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA dehydrogenase, C-2 to C-3 short chain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000411593 ACADS-002 ENSG00000122971 9606 + 12:120725861-120739594 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonKidneyLiverMuscleOvaryENST00000411593
Transcript ID Bladder Colon Kidney Liver Muscle Ovary
ENST00000411593 0.415±0.00 3.204±0.00 2.995±0.00 0.381±0.00 1.048±0.00 0.298±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0001 VISTA 12:120240385-120840841

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003995 IEA acyl-CoA dehydrogenase activity
GO:0008152 IEA metabolic process
GO:0016627 IEA oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031524 Acads-001 protein_coding Mus_musculus 0 782
ENSMUST00000131726 Acads-002 retained_intron Mus_musculus 0 782
ENSMUST00000150291 Acads-005 protein_coding Mus_musculus 0 420
ENSDART00000014669 acads-001 protein_coding Danio_rerio 0 268
ENSDART00000137686 acads-003 protein_coding Danio_rerio 4e-23 113

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