C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear GTPase, germinal center associated
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000413272 NUGGC-001 ENSG00000189233 9606 - 8:28021964-28083871 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000413272
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000413272 0.110±0.00 1.201±0.00 0.143±0.00 0.510±0.18 0.188±0.02 0.048±0.00 2.129±1.54 0.824±0.68 0.210±0.09 0.006±0.00 0.183±0.09 0.019±0.01 0.211±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DK CIL_0009DK_0001 VISTA 8:27594923-28195834

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005634 IEA nucleus
GO:0006184 IEA GTP catabolic process
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0016446 IEA somatic hypermutation of immunoglobulin genes

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079469 Nuggc-201 protein_coding Mus_musculus 0 2028
ENSMUST00000150897 Nuggc-001 protein_coding Mus_musculus 0 2028

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