C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleckstrin homology domain containing, family A member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414478 PLEKHA6-002 ENSG00000143850 9606 - 1:204221221-204359916 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000414478
Transcript ID Adipose Adrenal Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000414478 0.318±0.00 0.460±0.00 0.693±0.00 2.021±0.00 4.040±0.00 3.343±0.00 0.624±0.00 0.045±0.00 2.568±2.16 4.261±0.85 2.027±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W2 CIL_0008W2_0001 VISTA 1:203635137-204239984
CIL_00084Z CIL_00084Z_0001 VISTA 1:204154830-204755807
CIL_00046J CIL_00046J_0002 CGP 1:204198160-204377665

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105082 Plekha6-201 protein_coding Mus_musculus 0 4204
ENSMUST00000186917 Plekha6-002 protein_coding Mus_musculus 0 4200
ENSMUST00000187285 Plekha6-004 protein_coding Mus_musculus 0 3552
ENSMUST00000190186 Plekha6-003 protein_coding Mus_musculus 0 2200
ENSMUST00000038295 Plekha6-001 protein_coding Mus_musculus 0 1382
ENSMUST00000189598 Plekha6-010 protein_coding Mus_musculus 0 507
ENSMUST00000190694 Plekha6-009 processed_transcript Mus_musculus 0 390
ENSMUST00000190208 Plekha6-006 retained_intron Mus_musculus 0 329
ENSMUST00000190884 Plekha6-007 retained_intron Mus_musculus 0 224

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