C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000417555 PARPG1-001 ENSG00000239883 9606 - 10:45888165-45972154 transcribed_unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000417555
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000417555 0.043±0.00 0.168±0.00 0.931±0.75 0.089±0.00 0.573±0.00 0.154±0.00 0.090±0.00 0.037±0.00 0.312±0.13 0.064±0.01 0.136±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081B CIL_00081B_0001 VISTA 10:45257434-45860222

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022470 Parg-001 protein_coding Mus_musculus 0 2215
ENSMUST00000163350 Parg-002 protein_coding Mus_musculus 0 2215
ENSMUST00000164137 Parg-005 retained_intron Mus_musculus 0 1727
ENSMUST00000170840 Parg-003 protein_coding Mus_musculus 0 1454
ENSMUST00000170129 Parg-006 nonsense_mediated_decay Mus_musculus 0 1280
ENSMUST00000163957 Parg-009 processed_transcript Mus_musculus 0 662
ENSMUST00000167699 Parg-008 nonsense_mediated_decay Mus_musculus 0 363

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