C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger homeobox 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419474 ZFHX2-001 ENSG00000136367 9606 - 14:23520855-23551649 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverTestisENST00000419474
Transcript ID Heart Liver Testis
ENST00000419474 0.145±0.00 0.304±0.00 2.776±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090C CIL_00090C_0001 VISTA 14:23078458-23681621
CIL_0009BW CIL_0009BW_0001 VISTA 14:23137378-23739005
CIL_0008Q4 CIL_0008Q4_0001 VISTA 14:23138150-23738498
CIL_0008QH CIL_0008QH_0001 VISTA 14:23142404-23743714
CIL_0004Z4 CIL_0004Z4_0002 CGP 14:23520855-23560271

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003779 IEA actin binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007010 IEA cytoskeleton organization
GO:0008270 IEA zinc ion binding
GO:0030534 IEA adult behavior
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036328 Zfhx2-001 protein_coding Mus_musculus 0 8597
ENSMUST00000176665 Zfhx2-002 retained_intron Mus_musculus 0 1408
ENSMUST00000185121 Thtpa-002 protein_coding Mus_musculus 0 1020
ENSMUST00000185430 Zfhx2-004 retained_intron Mus_musculus 0 688
ENSMUST00000188534 Zfhx2-003 retained_intron Mus_musculus 0.00000002 68

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