C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | RAD50 homolog (S. cerevisiae) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000423956  |
RAD50-004 |
ENSG00000113522 |
9606 | + |
5:132557231-132609339  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00093D | CIL_00093D_0001 | VISTA | 5:131965137-132566411 |
| CIL_0007RF | CIL_0007RF_0001 | VISTA | 5:131967147-132570227 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000723 | IEA | telomere maintenance |
| GO:0005524 | IEA | ATP binding |
| GO:0005634 | IEA | nucleus |
| GO:0006281 | IEA | DNA repair |
| GO:0016887 | IEA | ATPase activity |
| GO:0030870 | IEA | Mre11 complex |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000128483
|
Rad50-002 | nonsense_mediated_decay | Mus_musculus | 0 | 3278 |
|
ENSMUST00000020649
|
Rad50-001 | protein_coding | Mus_musculus | 0 | 1853 |
|
ENSMUST00000124352
|
Rad50-005 | protein_coding | Mus_musculus | 0 | 1664 |
|
ENSMUST00000152598
|
Rad50-003 | processed_transcript | Mus_musculus | 0 | 407 |
|
ENSMUST00000126121
|
Rad50-004 | processed_transcript | Mus_musculus | 0 | 272 |
