C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RAD50 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128483 Rad50-002 ENSMUSG00000020380 10090 - 11:53674755-53707319 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeENSMUST00000128483
Transcript ID Adipose
ENSMUST00000128483 1.037±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0006281 IEA DNA repair
GO:0006974 ISO cellular response to DNA damage stimulus
GO:0030870 IEA Mre11 complex
GO:0045120 IDA pronucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378823 RAD50-001 protein_coding Homo_sapiens 0 1853
ENST00000416135 RAD50-006 protein_coding Homo_sapiens 0 599
ENST00000423956 RAD50-004 nonsense_mediated_decay Homo_sapiens 0 3278
ENST00000434288 RAD50-005 protein_coding Homo_sapiens 1e-32 145
ENST00000453394 RAD50-003 protein_coding Homo_sapiens 0 1666
ENST00000487596 RAD50-007 retained_intron Homo_sapiens 0 771
ENST00000496204 RAD50-008 processed_transcript Homo_sapiens 0 291
ENST00000533482 RAD50-002 nonsense_mediated_decay Homo_sapiens 0 1430

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