C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 398
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000426851 ZNF398-001 ENSG00000197024 9606 + 7:149126416-149182802 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainKidneyLungMuscleOvaryTestisENST00000426851
Transcript ID Adrenal Brain Kidney Lung Muscle Ovary Testis
ENST00000426851 1.290±0.00 1.934±0.00 1.829±0.00 0.608±0.26 0.543±0.00 1.687±0.93 2.244±0.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XN CIL_0004XN_0001 CGP 7:149126416-149226248

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 NAS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0045893 NAS positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079881 Zfp398-001 protein_coding Mus_musculus 0 2198
ENSMUST00000114598 Zfp398-002 protein_coding Mus_musculus 0 1672
ENSMUST00000146202 Zfp398-003 retained_intron Mus_musculus 0 532
ENSMUST00000156500 Zfp212-002 retained_intron Mus_musculus 0 209
ENSMUST00000009411 Zfp212-001 protein_coding Mus_musculus 0 209
ENSMUST00000073124 Zfp746-201 protein_coding Mus_musculus 0 207
ENSMUST00000140719 Zfp956-002 nonsense_mediated_decay Mus_musculus 3e-30 139
ENSMUST00000174790 Zfp956-003 retained_intron Mus_musculus 3e-30 139
ENSMUST00000101445 Zfp956-001 protein_coding Mus_musculus 3e-30 139

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