C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ephrin-A4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000427683 EFNA4-003 ENSG00000243364 9606 + 1:155063761-155069538 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverLungOvaryPlacentaTestisENST00000427683
Transcript ID Adrenal Breast Colon Liver Lung Ovary Placenta Testis
ENST00000427683 1.293±0.00 0.634±0.00 1.238±0.04 1.572±0.00 1.403±0.00 3.593±1.63 1.896±0.26 1.552±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005005 TAS transmembrane-ephrin receptor activity
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0005886 IBA plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007267 TAS cell-cell signaling
GO:0007411 IBA axon guidance
GO:0016020 IEA membrane
GO:0030316 IBA osteoclast differentiation
GO:0031225 IEA anchored component of membrane
GO:0046849 IBA bone remodeling
GO:0046875 IPI ephrin receptor binding
GO:0048013 IBA ephrin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029674 Efna4-001 protein_coding Mus_musculus 0 540

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