C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: boule-like RNA-binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000433157 BOLL-006 ENSG00000152430 9606 - 2:197728534-197785010 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonKidneyLungMuscleOvaryTestisENST00000433157
Transcript ID Adrenal Brain Colon Kidney Lung Muscle Ovary Testis
ENST00000433157 0.033±0.00 0.019±0.00 0.063±0.00 0.015±0.00 0.008±0.00 0.243±0.02 0.009±0.00 44.152±31.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002K3 CIL_0002K3_0001 CGP 2:197726879-198572581

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0007126 IDA meiotic nuclear division
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0008494 IDA translation activator activity
GO:0030154 IEA cell differentiation
GO:0045948 IDA positive regulation of translational initiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173983 Boll-004 protein_coding Mus_musculus 0 1230
ENSMUST00000114423 Boll-002 protein_coding Mus_musculus 0 1157
ENSMUST00000087585 Boll-001 protein_coding Mus_musculus 0 1157
ENSMUST00000159564 Boll-006 nonsense_mediated_decay Mus_musculus 0 608
ENSMUST00000161472 protein_coding Mus_musculus 0 599
ENSMUST00000159398 Boll-003 protein_coding Mus_musculus 0 553
ENSMUST00000161810 Boll-005 nonsense_mediated_decay Mus_musculus 0 209
ENSMUST00000174065 Boll-007 processed_transcript Mus_musculus 0 206

Loading