C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vezatin, adherens junctions transmembrane protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436874 VEZT-001 ENSG00000028203 9606 + 12:95217746-95302790 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000436874
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000436874 0.863±0.00 2.134±0.14 1.988±0.84 1.884±0.00 1.287±0.24 1.558±0.00 0.696±0.00 2.577±0.00 4.106±0.00 1.996±0.23 1.230±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Y0 CIL_0000Y0_0002 CGP 12:95076749-95302790
CIL_0000Y1 CIL_0000Y1_0002 CGP 12:95217746-95515839

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002142 IEA stereocilia ankle link complex
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0016337 IEA single organismal cell-cell adhesion
GO:0017022 IEA myosin binding
GO:0030054 IEA cell junction
GO:0031410 IEA cytoplasmic vesicle
GO:0043009 IEA chordate embryonic development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047711 Vezt-002 protein_coding Mus_musculus 0 2518
ENSMUST00000119818 Vezt-001 protein_coding Mus_musculus 0 2483
ENSMUST00000118205 Vezt-006 protein_coding Mus_musculus 0 1967
ENSMUST00000118077 Vezt-007 protein_coding Mus_musculus 0 1905
ENSMUST00000150704 Vezt-003 nonsense_mediated_decay Mus_musculus 0 765
ENSMUST00000141241 Vezt-004 nonsense_mediated_decay Mus_musculus 0 556
ENSMUST00000123201 Vezt-005 protein_coding Mus_musculus 0 531
ENSMUST00000132735 Vezt-010 retained_intron Mus_musculus 0 285

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