C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438601 RP1-308E4.1-001 ENSG00000229820 9606 + 1:28453541-28453934 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartLiverLungOvaryPlacentaTestisENST00000438601
Transcript ID Adrenal Brain Breast Heart Liver Lung Ovary Placenta Testis
ENST00000438601 0.424±0.00 0.032±0.00 0.064±0.00 0.028±0.00 0.121±0.00 0.957±0.00 0.265±0.24 0.226±0.00 0.220±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094657 Dnajc8-001 protein_coding Mus_musculus 0 507
ENSMUST00000150207 Dnajc8-009 protein_coding Mus_musculus 0 435
ENSMUST00000139074 Dnajc8-003 nonsense_mediated_decay Mus_musculus 0 429
ENSMUST00000142281 Dnajc8-002 retained_intron Mus_musculus 0 364
ENSMUST00000138334 Dnajc8-007 nonsense_mediated_decay Mus_musculus 0 322
ENSMUST00000067467 Dnajc8-010 nonsense_mediated_decay Mus_musculus 0 305
ENSMUST00000105939 Dnajc8-006 protein_coding Mus_musculus 0 283
ENSMUST00000144073 Dnajc8-004 nonsense_mediated_decay Mus_musculus 0 231
ENSMUST00000105940 Dnajc8-008 protein_coding Mus_musculus 0 230

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