C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438847 CHST8-001 ENSG00000124302 9606 + 19:33621971-33773509 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLungMuscleOvaryPlacentaENST00000438847
Transcript ID Adipose Adrenal Brain Breast Colon Heart Lung Muscle Ovary Placenta
ENST00000438847 0.122±0.00 0.887±0.00 1.810±1.01 3.209±0.00 0.396±0.00 0.040±0.00 0.038±0.00 0.113±0.00 1.356±0.30 0.059±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UI CIL_0003UI_0002 CGP 19:33386950-33773509

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001537 IDA N-acetylgalactosamine 4-O-sulfotransferase activity
GO:0005794 IEA Golgi apparatus
GO:0006790 IDA sulfur compound metabolic process
GO:0007417 NAS central nervous system development
GO:0008146 IEA sulfotransferase activity
GO:0016021 IEA:NAS integral component of membrane
GO:0016051 IEA carbohydrate biosynthetic process
GO:0030166 IDA proteoglycan biosynthetic process
GO:0042446 IEP hormone biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078686 Chst8-001 protein_coding Mus_musculus 0 1194
ENSMUST00000154629 Chst8-002 nonsense_mediated_decay Mus_musculus 0 994

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