C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: unc-80 homolog (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439458 UNC80-201 ENSG00000144406 9606 + 2:209771993-209999300 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonENST00000439458
Transcript ID Brain Colon
ENST00000439458 2.144±0.21 0.048±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000136 CIL_000136_0001 CGP 2:209424058-209999300
CIL_0006P1 CIL_0006P1_0001 CGP 2:209771993-210022259

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0016021 IEA integral component of membrane
GO:0034220 TAS ion transmembrane transport
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061620 Unc80-001 protein_coding Mus_musculus 0 7215
ENSMUST00000114008 Unc80-004 nonsense_mediated_decay Mus_musculus 0 1085
ENSMUST00000136727 Unc80-003 retained_intron Mus_musculus 0 1066
ENSMUST00000152844 Unc80-002 protein_coding Mus_musculus 0 861
ENSDART00000156183 UNC80 (1 of 2)-001 protein_coding Danio_rerio 0 852
ENSDART00000156076 UNC80 (2 of 2)-001 protein_coding Danio_rerio 0 387
ENSMUST00000187179 Unc80-005 retained_intron Mus_musculus 0 237

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