C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribonuclease P/MRP 14kDa subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000445193 RPP14-008 ENSG00000163684 9606 + 3:58306262-58324695 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000445193
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000445193 0.820±0.00 0.402±0.00 1.147±0.34 0.663±0.00 0.784±0.00 1.675±1.22 0.945±0.12 0.768±0.40 0.848±0.00 1.120±0.00 1.889±0.56 0.733±0.06 0.370±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UK CIL_0002UK_0001 CGP 3:58237506-58324695
CIL_0002AK CIL_0002AK_0001 CGP 3:58306247-58324695

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 TAS RNA binding
GO:0004526 IEA ribonuclease P activity
GO:0004540 IEA ribonuclease activity
GO:0005634 IEA nucleus
GO:0008033 IEA tRNA processing
GO:0090502 IEA RNA phosphodiester bond hydrolysis, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023924 Rpp14-001 protein_coding Mus_musculus 0 457
ENSMUST00000180369 Rpp14-001 protein_coding Mus_musculus 0 449
ENSMUST00000105140 AW011738-201 protein_coding Mus_musculus 0.0005 53

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