C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: achaete-scute family bHLH transcription factor 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000449188 ASCL5-001 ENSG00000232237 9606 - 1:201113953-201127184 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyMuscleOvaryTestisENST00000449188
Transcript ID Brain Kidney Muscle Ovary Testis
ENST00000449188 0.153±0.05 0.021±0.00 0.225±0.00 0.063±0.02 0.051±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180436 Ascl5-001 protein_coding Mus_musculus 0 440
ENSMUST00000170396 Ascl4-002 protein_coding Mus_musculus 1e-30 139
ENSMUST00000156605 Ascl4-001 nonsense_mediated_decay Mus_musculus 0.000000000000004 88

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