C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 160, member A2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000449352 FAM160A2-002 ENSG00000051009 9606 - 11:6211335-6234616 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000449352
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000449352 4.440±0.00 1.739±0.00 3.186±0.00 3.139±0.00 2.231±0.00 1.585±1.16 1.873±0.99 7.741±0.00 3.600±0.00 6.807±4.14 3.820±1.04 12.868±5.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003R5 CIL_0003R5_0002 CGP 11:6211335-6244429

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0007032 IMP endosome organization
GO:0007040 IMP lysosome organization
GO:0008333 IMP endosome to lysosome transport
GO:0015031 IEA protein transport
GO:0045022 IMP early endosome to late endosome transport
GO:0070695 IDA FHF complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048079 Fam160a2-001 protein_coding Mus_musculus 0 4200
ENSMUST00000122327 Fam160a2-004 protein_coding Mus_musculus 0 4196
ENSMUST00000074686 Fam160a2-201 protein_coding Mus_musculus 0 2944
ENSMUST00000179474 Fam160a2-202 protein_coding Mus_musculus 0 2143
ENSMUST00000118726 Fam160a2-002 protein_coding Mus_musculus 0 2143
ENSMUST00000137158 Fam160a2-003 nonsense_mediated_decay Mus_musculus 0 2071
ENSMUST00000142559 Fam160a2-006 retained_intron Mus_musculus 0 664
ENSMUST00000136298 Fam160a2-005 retained_intron Mus_musculus 0 654
ENSMUST00000094148 Fam160a1-201 protein_coding Mus_musculus 8e-24 117
ENSMUST00000119077 Fam160a1-002 protein_coding Mus_musculus 8e-24 117
ENSMUST00000118408 Fam160a1-001 protein_coding Mus_musculus 8e-24 117
ENSMUST00000126445 Fam160a1-003 retained_intron Mus_musculus 8e-24 117

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