C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ariadne RBR E3 ubiquitin protein ligase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000449376 ARIH2-002 ENSG00000177479 9606 + 3:48918836-48983620 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverMuscleTestisENST00000449376
Transcript ID Heart Liver Muscle Testis
ENST00000449376 17.037±11.06 6.862±0.00 17.042±0.29 28.716±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 IDA protein polyubiquitination
GO:0003676 IEA nucleic acid binding
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0007275 TAS multicellular organismal development
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0042787 IDA protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0048588 IDA developmental cell growth
GO:0070534 IDA protein K63-linked ubiquitination
GO:0070936 IDA protein K48-linked ubiquitination
GO:0071425 IDA hematopoietic stem cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000013338 Arih2-201 protein_coding Mus_musculus 0 2468
ENSMUST00000119105 Gm12263-001 processed_pseudogene Mus_musculus 0 1967
ENSDART00000004521 arih2-001 protein_coding Danio_rerio 0 913
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000003 58
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00004 55

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