C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: unc-5 homolog C (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000453304 UNC5C-001 ENSG00000182168 9606 - 4:95162504-95549206 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLungMusclePlacentaTestisENST00000453304
Transcript ID Adipose Adrenal Brain Breast Colon Heart Lung Muscle Placenta Testis
ENST00000453304 0.053±0.00 0.595±0.00 1.123±0.17 0.077±0.00 0.158±0.00 0.216±0.00 0.575±0.00 0.071±0.00 0.231±0.11 0.702±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BZ CIL_0005BZ_0002 CGP 4:94757968-95549206

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005042 IEA netrin receptor activity
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0006915 IEA apoptotic process
GO:0007165 IEA signal transduction
GO:0007411 TAS axon guidance
GO:0007420 IEA brain development
GO:0016021 IEA integral component of membrane
GO:0030334 IEA regulation of cell migration
GO:0033564 IEA anterior/posterior axon guidance
GO:0038007 IEA netrin-activated signaling pathway
GO:0043065 IEA positive regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106236 Unc5c-001 protein_coding Mus_musculus 0 4420
ENSMUST00000130636 Unc5c-003 protein_coding Mus_musculus 0 2924
ENSMUST00000075282 Unc5c-002 protein_coding Mus_musculus 0 2924
ENSMUST00000142762 Unc5c-005 nonsense_mediated_decay Mus_musculus 0 2231
ENSMUST00000155416 Unc5c-004 retained_intron Mus_musculus 0 512
ENSMUST00000123631 Unc5c-007 retained_intron Mus_musculus 0 353
ENSMUST00000151007 Unc5c-006 processed_transcript Mus_musculus 0 243

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