C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 562
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000453372 ZNF562-002 ENSG00000171466 9606 - 19:9652279-9675044 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonLungOvaryENST00000453372
Transcript ID Bladder Brain Breast Colon Lung Ovary
ENST00000453372 1.316±0.00 2.312±0.00 4.203±0.00 2.175±0.00 3.692±0.00 3.664±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075263 Zfp26-004 retained_intron Mus_musculus 4e-25 121
ENSMUST00000098970 Zfp26-002 retained_intron Mus_musculus 1e-24 119
ENSMUST00000159569 Zfp26-001 protein_coding Mus_musculus 1e-24 119
ENSMUST00000167457 Zfp426-003 protein_coding Mus_musculus 3e-21 108
ENSMUST00000166005 Zfp426-201 protein_coding Mus_musculus 1e-20 106
ENSMUST00000164799 Zfp426-006 protein_coding Mus_musculus 1e-20 106
ENSMUST00000164825 Zfp426-011 protein_coding Mus_musculus 1e-20 106
ENSMUST00000163348 Zfp426-012 protein_coding Mus_musculus 1e-20 106
ENSMUST00000080386 Zfp426-002 protein_coding Mus_musculus 1e-20 106
ENSMUST00000169558 Zfp426-004 protein_coding Mus_musculus 1e-20 106
ENSMUST00000115562 Zfp426-001 protein_coding Mus_musculus 1e-20 106
ENSMUST00000168095 Zfp426-008 nonsense_mediated_decay Mus_musculus 1e-20 106
ENSMUST00000045228 Zkscan8-001 protein_coding Mus_musculus 0.0000002 62
ENSMUST00000165640 Zfp113-201 protein_coding Mus_musculus 0.000003 58
ENSMUST00000144786 Zfp113-003 processed_transcript Mus_musculus 0.000003 58
ENSMUST00000049393 Zfp113-001 protein_coding Mus_musculus 0.000003 58
ENSMUST00000032802 Zfp84-001 protein_coding Mus_musculus 0.0001 53

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