C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ring finger protein 5, E3 ubiquitin protein ligase | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000453473  |
RNF5-001 |
ENSG00000228907 |
9606 | + |
CHR_HSCHR6_MHC_MANN_CTG1:32217742-32220181  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004842 | IDA | ubiquitin-protein transferase activity |
| GO:0005515 | IPI:IEA | protein binding |
| GO:0005739 | IEA | mitochondrion |
| GO:0005783 | IEA | endoplasmic reticulum |
| GO:0008270 | IEA | zinc ion binding |
| GO:0016021 | IEA | integral component of membrane |
| GO:0016874 | IEA | ligase activity |
| GO:0044257 | IMP | cellular protein catabolic process |
| GO:0046872 | IEA | metal ion binding |
| GO:0070534 | IDA | protein K63-linked ubiquitination |
| GO:0070936 | IDA | protein K48-linked ubiquitination |
| GO:0071712 | IMP | ER-associated misfolded protein catabolic process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000015622
|
Rnf5-001 | protein_coding | Mus_musculus | 0 | 856 |
|
ENSMUST00000174045
|
Rnf5-002 | retained_intron | Mus_musculus | 0 | 418 |
|
ENSMUST00000174475
|
Rnf5-003 | retained_intron | Mus_musculus | 0 | 233 |
