C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000458010 AC104451.2-001 ENSG00000233133 9606 - 3:17706058-17706233 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000458010
Transcript ID Testis
ENST00000458010 0.186±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HQ CIL_0004HQ_0001 CGP 3:17157162-18445588
CIL_0008ZJ CIL_0008ZJ_0001 VISTA 3:17267063-17867995
CIL_0007OK CIL_0007OK_0001 UCNEbase 3:17286171-18992888
CIL_0007ZY CIL_0007ZY_0001 VISTA 3:17646140-18247453

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163950 Npepps-009 retained_intron Mus_musculus 0 243
ENSMUST00000154917 Npepps-003 nonsense_mediated_decay Mus_musculus 0 243
ENSMUST00000168743 Npepps-014 protein_coding Mus_musculus 0 243
ENSMUST00000165216 Npepps-012 protein_coding Mus_musculus 0 243
ENSMUST00000001480 Npepps-001 protein_coding Mus_musculus 0 243
ENSMUST00000172108 Npepps-010 protein_coding Mus_musculus 0 243
ENSMUST00000167806 Npepps-011 protein_coding Mus_musculus 0 243

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